Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTCAGCTGCAGCA
.....(((((((((((((((.&))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014260
GeneSymbolPFDN6
Binding site435,453
Score0.846
Seed0
Au0.368
Energy-22.1
Binding len18
Me-13.666
Phylopstem3.0753754705882357
Phylopflank2.754588345000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure