Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTACATCAACATGCCAGGC
.((((((((...((((((((((&))))))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014266
GeneSymbolHCST
Binding site315,338
Score0.923
Seed1
Au0.426
Energy-23.9
Binding len23
Me-11.207
Phylopstem1.4209126
Phylopflank0.25407319500000003
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure