Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCCCTATGCCAGGC
.(((((((((....((((((..&))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014284
GeneSymbolNCDN
Binding site925,943
Score0.846
Seed1
Au0.382
Energy-20.8
Binding len18
Me-12.111
Phylopstem3.270511888888889
Phylopflank2.5065841962500004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure