Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGTCATAAATAGAAAACACTGTGTGTGCTCAGGG
.(((((((((((..((......&.))..))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001353130
GeneSymbolPBX1
Binding site3451,3489
Score0.923
Seed1
Au0.544
Energy-18.6
Binding len18
Me-5.939
Phylopstem-0.26699999999999996
Phylopflank-0.336025
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure