Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGCGGCCGCCGCGCACAGTCAGCGCTGGCCCAGCTGCGT
.(((((((((((((((..(((&)))..))))))))......................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014291
GeneSymbolGCAT
Binding site75,118
Score0.846
Seed1
Au0.279
Energy-23.6
Binding len43
Me-3.793
Phylopstem1.412642983783784
Phylopflank2.0270612949999998
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end6
PositionCDS
2D Structure