Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCAATATTGTATCAACGCCAGGA
.(((((((((((((((.((...&)).)))))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014292
GeneSymbolCBX6
Binding site5931,5954
Score0.846
Seed1
Au0.529
Energy-19.5
Binding len23
Me-3.793
Phylopstem4.881205715789474
Phylopflank3.8402819100000007
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end4
Position3UTR
2D Structure