Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTTGAAGAGGTGAAAATGGTTTTGGAGAAGCGCAGCTGCT
..(((((((((.((.(.....&.).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014292
GeneSymbolCBX6
Binding site4539,4583
Score1.0
Seed1
Au0.441
Energy-21.7
Binding len16
Me-9.039
Phylopstem0.27441251111111115
Phylopflank0.16992707999999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure