Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGGCACCACAGCTGCAT
.((((((((.((.(((.((((&)))).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014293
GeneSymbolNPTXR
Binding site3410,3430
Score0.969
Seed1
Au0.5
Energy-22.8
Binding len20
Me-6.325
Phylopstem0.27472805
Phylopflank-0.11409926250000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure