Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGCTTCCAGGGA
...(((((.((((.(((((..&)))))))))..))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001353130
GeneSymbolPBX1
Binding site3370,3387
Score0.846
Seed0
Au0.441
Energy-23.0
Binding len17
Me-8.428
Phylopstem-0.1306
Phylopflank0.19280000000000003
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure