Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTGTGTTTTTTTTTTTCCCCCGGGCGGCCCGGCGGCTGCGT
.(((((((((((((((..((.&.))..))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014294
GeneSymbolTRAM1
Binding site23,68
Score0.923
Seed1
Au0.368
Energy-25.7
Binding len23
Me-3.793
Phylopstem0.07800677647058826
Phylopflank-0.03472069791666669
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure