Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGATGCTCAGGA
.((((((((.((((((((....&)))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014299
GeneSymbolBRD4
Binding site3798,3816
Score0.981
Seed1
Au0.382
Energy-22.1
Binding len18
Me-5.036
Phylopstem3.106837125
Phylopflank2.2083524937499996
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure