Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTGGCAGCTCTCCTCAGCTCCTTGGGCTTGAGCAGCTGCAAC
(((((((((((((..(((((.&.))))).)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014299
GeneSymbolBRD4
Binding site3692,3737
Score1.0
Seed1
Au0.382
Energy-23.8
Binding len24
Me-5.53
Phylopstem2.1441294374999997
Phylopflank2.2177862562499997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure