Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACTAAACTGCCCTGAATCTCGGCTTCCTTAGCTGCAAA
(((((((((.((..((.((((&.))))..))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014301
GeneSymbolISCU
Binding site766,807
Score0.821
Seed1
Au0.529
Energy-20.9
Binding len24
Me-7.326
Phylopstem0.34973176666666667
Phylopflank-0.1413335387500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure