Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGCCACCGCTGCTGCAGC
(((((((.(((((.((..(((&)))...)).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014309
GeneSymbolRBFOX2
Binding site1175,1198
Score1.0
Seed1
Au0.368
Energy-24.6
Binding len23
Me-7.108
Phylopstem1.466648
Phylopflank1.8202020474999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure