Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTCATTGTTGGCCAGGG
.((((((..((((((.(((...&))).))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014311
GeneSymbolSMUG1
Binding site1986,2005
Score0.846
Seed1
Au0.441
Energy-23.3
Binding len19
Me-7.396
Phylopstem2.1035783333333335
Phylopflank2.41359216
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure