Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGTGATGCAGCCCTCTGCCGGCAGGTGCAGCTGCT
..(((((((((.((((..(((&.))).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014311
GeneSymbolSMUG1
Binding site717,755
Score0.846
Seed1
Au0.309
Energy-26.6
Binding len20
Me-8.304
Phylopstem-0.38884998888888894
Phylopflank-0.12057200874999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure