Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGAGCACGCCCCTGGGGAAGACAGCCGAGCTGA
...(((((.(((((((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014312
GeneSymbolVSIG2
Binding site210,248
Score0.923
Seed0
Au0.324
Energy-19.2
Binding len14
Me-7.571
Phylopstem0.8292131428571429
Phylopflank1.3034319075
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure