Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATAGATGCAGCTGTT
..(((((((((.((((.....&)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014313
GeneSymbolTMEM50A
Binding site253,268
Score0.846
Seed1
Au0.632
Energy-16.3
Binding len15
Me-8.304
Phylopstem5.127487777777777
Phylopflank4.0863643125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure