Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCGGGGGGCTGGGGTGGTG
..(((((.(((((.((((.((&)).))))))))).)).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014316
GeneSymbolCARHSP1
Binding site1277,1297
Score0.846
Seed0
Au0.338
Energy-26.1
Binding len20
Me-8.127
Phylopstem-0.8229344199999999
Phylopflank-0.0017486862499999853
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure