Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATAGCCAACAGTTGTAAA
(((((((((.((((((.((((&)))).))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014317
GeneSymbolPDSS1
Binding site816,839
Score0.885
Seed1
Au0.485
Energy-22.0
Binding len23
Me-5.18
Phylopstem7.041451111111112
Phylopflank5.23133638
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure