Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCGCTCCCACCTGGCCTGTCATGAAGACAAGGTGCCCTGCCAGGTG
(((((((((((..(((......&.)))..)))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014323
GeneSymbolPATZ1
Binding site2110,2160
Score0.846
Seed1
Au0.426
Energy-17.5
Binding len21
Me-8.574
Phylopstem2.2960513571428574
Phylopflank3.5910222012499995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure