Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACATCTGCCAGAGCTGTGGG
((((((((((((.((((((((&)))))))).))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014323
GeneSymbolPATZ1
Binding site1976,2001
Score1.0
Seed1
Au0.426
Energy-24.9
Binding len25
Me-5.227
Phylopstem4.721149800000001
Phylopflank5.863170565000001
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure