Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCAGCAGCCGTAGCCGCT
..((.(((((((((((.....&.))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014328
GeneSymbolRUSC1
Binding site1057,1080
Score0.923
Seed0
Au0.368
Energy-22.9
Binding len16
Me-9.076
Phylopstem1.8157417590909093
Phylopflank2.65777960875
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure