Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTCAGCTGGGG
.((((((..(((((((......&)))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001353179
GeneSymbolOVCH1
Binding site2443,2459
Score0.846
Seed1
Au0.426
Energy-17.5
Binding len16
Me-7.163
Phylopstem0.4823015714285714
Phylopflank0.011943345000000022
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure