Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GATCGCAGCTCAGA
(((.((((((((((.......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014332
GeneSymbolSMPX
Binding site64,78
Score0.923
Seed0
Au0.426
Energy-17.4
Binding len14
Me-7.938
Phylopstem2.6037326999999997
Phylopflank1.4223193925
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure