Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGAGCTGCAT
.(((((((.(((((((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014338
GeneSymbolPISD
Binding site533,548
Score0.923
Seed1
Au0.324
Energy-21.4
Binding len15
Me-4.85
Phylopstem0.3761085771428572
Phylopflank-0.27012798549999995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure