Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTTGAAGTGTGCCAGGA
.((((((((((...........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014339
GeneSymbolIL17RA
Binding site7297,7316
Score0.923
Seed1
Au0.382
Energy-19.4
Binding len12
Me-10.255
Phylopstem-0.13321845
Phylopflank-0.059102243750000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure