Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACGATCAAGCAGTGGAGTGCT
..((((((((((((((((((.&))))))))))..)))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353179
GeneSymbolOVCH1
Binding site1183,1208
Score0.923
Seed1
Au0.632
Energy-18.6
Binding len25
Me-4.957
Phylopstem0.19797487500000002
Phylopflank0.03356677875000002
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure