Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAACTGTGGTC
.....(((((((((.(((((.&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014342
GeneSymbolMTCH2
Binding site339,355
Score0.923
Seed0
Au0.529
Energy-18.1
Binding len16
Me-14.401
Phylopstem0.8484493333333334
Phylopflank0.48041854625000013
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure