Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGCCCGGCTGCT
..(((((((.((((((..(((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014344
GeneSymbolFJX1
Binding site1326,1343
Score0.846
Seed1
Au0.221
Energy-23.3
Binding len17
Me-6.2
Phylopstem2.368741
Phylopflank2.9249861242499997
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure