Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGCCCACCTGCCTGGTCTGCGTGTGCCTCGGTT
(((.(((((((...(((((((.&.))))))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014359
GeneSymbolOPTC
Binding site475,512
Score0.846
Seed0
Au0.441
Energy-19.6
Binding len21
Me-12.462
Phylopstem3.6450468571428574
Phylopflank1.4362416775
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure