Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAAATCGGCTCCAGAGCTCGGGGATACAGCCTGCAGCCTTCAGGGCAATGGAGAAGCTGCAGT
((((((((..((((((.((((&.))))))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014359
GeneSymbolOPTC
Binding site791,857
Score0.846
Seed1
Au0.471
Energy-21.9
Binding len36
Me-6.236
Phylopstem2.0299277499999997
Phylopflank1.7690365115
Longest consecutive pairings10
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure