Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAGCCCAGCAGCTGACAAC
((((((((((((((.(.(((.&)))).))))..))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014361
GeneSymbolCNTN5
Binding site2599,2622
Score0.923
Seed1
Au0.426
Energy-21.2
Binding len23
Me-4.673
Phylopstem4.995051317647059
Phylopflank4.523097410000001
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure