Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATTGAGAGTCAGGTA
(((((((...((((((((....&))))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014368
GeneSymbolLHX6
Binding site1260,1279
Score0.923
Seed1
Au0.353
Energy-20.7
Binding len19
Me-8.55
Phylopstem-0.123430125
Phylopflank0.20602456199999997
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure