Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACGGCAGCTGCTGGCTGTGAC
((((((((((((((((...((&))...)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014387
GeneSymbolLAT
Binding site1629,1652
Score0.846
Seed1
Au0.471
Energy-21.9
Binding len23
Me-3.938
Phylopstem-0.2647327058823529
Phylopflank-0.4197666187500001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure