Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAACTGCAGCAAAACTGCAT
.(((((((((((((.(..(((&)))).))))))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014388
GeneSymbolUTP25
Binding site6121,6145
Score0.923
Seed1
Au0.559
Energy-19.3
Binding len24
Me-4.529
Phylopstem0.40325199999999994
Phylopflank-0.3019190525
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure