Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGGAGCTGTTGTTACAGTAGCTGTAAT
((((((((((((((.((((..&)))).)))).........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014393
GeneSymbolSTAU2
Binding site3225,3254
Score0.846
Seed1
Au0.691
Energy-19.5
Binding len29
Me-4.673
Phylopstem5.441930869565218
Phylopflank4.593326255
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure