Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGCAGCCATGGTTGGAGCTGGAAT
((.(((((.((((((((((((&))))).))))))......).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014394
GeneSymbolGHITM
Binding site619,648
Score0.923
Seed0
Au0.529
Energy-21.2
Binding len29
Me-6.552
Phylopstem4.846615157894737
Phylopflank3.899344904999999
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure