Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCTAGCTGCAT
.(((((((..(((((((....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014396
GeneSymbolVPS41
Binding site154,169
Score0.846
Seed1
Au0.559
Energy-18.7
Binding len15
Me-6.092
Phylopstem0.10078742857142857
Phylopflank0.025692825000000013
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure