Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCAGATGCTGAAGGCAGAGCAGCTGA
...(((((((.((((((((((&))))))))))................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014397
GeneSymbolNEK6
Binding site1242,1276
Score0.923
Seed0
Au0.382
Energy-23.3
Binding len34
Me-9.339
Phylopstem0.4642733
Phylopflank0.6884182875000002
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure