Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTCCTGGAGGAAACACCCAGGGCCGGGCGGCTGCT
..((((((((((((.(..(((&.))).).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014397
GeneSymbolNEK6
Binding site2421,2460
Score0.821
Seed1
Au0.368
Energy-21.5
Binding len22
Me-5.692
Phylopstem0.4460730928571429
Phylopflank-0.17818342750000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure