Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTTCAACCCACCCATGCCCCAGGAACAACGGCAGCTGCC
..((((((((.(((((.....&.))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014398
GeneSymbolLAMP3
Binding site630,673
Score0.923
Seed1
Au0.368
Energy-24.6
Binding len16
Me-7.782
Phylopstem-0.4934843125
Phylopflank0.0062722262500000125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure