Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTTGCGGCTTTGGGAAATAAAATACCGTTGTATATATTCTGCCAGGG
.((((((((((((((.......&.))))))).......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014400
GeneSymbolLYPD3
Binding site1225,1274
Score0.923
Seed1
Au0.588
Energy-18.5
Binding len23
Me-4.026
Phylopstem0.6920334095238095
Phylopflank1.6232942637499999
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end1
Position3UTR
2D Structure