Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCAGGACCGCAGCAATTCAGGGCAGTATCCTGCAAA
((((((((((((((.(..(((&)))...).))))))))).................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014400
GeneSymbolLYPD3
Binding site941,981
Score0.923
Seed1
Au0.412
Energy-21.6
Binding len40
Me-4.673
Phylopstem1.8618824032258068
Phylopflank1.7175948837500004
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end5
PositionCDS
2D Structure