Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGGTGCGATGCGACCGCGGGCTGCAGA
(((((((((((((((((..((&.))..))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014405
GeneSymbolCACNG4
Binding site202,233
Score0.923
Seed1
Au0.279
Energy-28.8
Binding len24
Me-3.938
Phylopstem2.667112055555555
Phylopflank2.151013945
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure