Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCACGAAGGTTGTGCTGGGAGACCGGACCCGGGGCTGCAGA
((((((((.(((..((..(((&.)))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014405
GeneSymbolCACNG4
Binding site1332,1378
Score1.0
Seed1
Au0.382
Energy-23.8
Binding len21
Me-7.14
Phylopstem-0.376686375
Phylopflank-0.066935997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure