Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATTGTAGTGTTTGCCAGGA
.(((((((((((((((......&)))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014408
GeneSymbolTRAPPC3
Binding site1105,1126
Score0.846
Seed1
Au0.5
Energy-20.4
Binding len21
Me-3.793
Phylopstem5.69494175
Phylopflank4.74172362125
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end2
Position3UTR
2D Structure