Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAAATCCTGAAATAAAAAAGGATAATGCAATAAACACAGTTGCAGG
(((((((((.(((((((....&.))))))...).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014410
GeneSymbolCLUL1
Binding site1608,1659
Score0.923
Seed1
Au0.721
Energy-16.6
Binding len22
Me-5.18
Phylopstem0.07012233333333334
Phylopflank0.27807983625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure