Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTAGGAGTATGTCAGA
..(((((((((..(.(((((..&))))).).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014412
GeneSymbolCACYBP
Binding site1664,1682
Score0.846
Seed1
Au0.676
Energy-17.3
Binding len18
Me-10.328
Phylopstem0.6712846666666665
Phylopflank0.07876826575000008
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure