Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCCACTGCAGT
((((((..((((((((.....&))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014417
GeneSymbolBBC3
Binding site125,142
Score0.962
Seed0
Au0.338
Energy-22.1
Binding len17
Me-7.795
Phylopstem2.206639875
Phylopflank2.093679425
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
Position5UTR
2D Structure